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Maize gene database

WebOct 22, 2024 · MaizeMine is the data mining resource of the Maize Genetics and Genome Database (MaizeGDB; http://maizemine.maizegdb.org ). It enables researchers to create and export customized annotation datasets that can be merged with their own research data for use in downstream analyses. WebJan 1, 2015 · A maize database resource that captures tissue-specific and subcellular-localized gene expression, via fluorescent tags and confocal imaging (Maize Cell …

MaizeGDB 2024: the maize multi-genome genetics and genomics …

WebFeb 24, 2006 · The database consists of approximately 298 Mb representing 243,807 sequence assemblies and singletons, resulting from approximately 900,000 gene-enriched reads from maize. In this resource, the AZMs ( Assembled Zea mays) were assembled and annotated and available sequenced markers were used to anchor AZMs to maize … WebFeb 20, 2016 · Compared to the ProFITS database, the MGFD database has more powerful data and function. At first, the MGFD contains 96 maize gene families, while the ProFITS … pc check for gta 5 https://eastwin.org

Agronomy Free Full-Text CT-Based Phenotyping and Genome …

WebMaize was domesticated from wild teosinte in Central America and its cultivation spread throughout the Americas by Pre-Columbian civilisations. In addition to its economic … WebMaize (Zea mays) was McClintock’s plant model of choice, and has served as a model organism for over a hundred years. Maize is also of substantial economic significance in the United States. ... Database can be queried by AGPv2/v3 gene IDs. The new AGPv4 IDs should be converted to AGPv3 using “ID convert”. Original data and source code ... WebDec 6, 2024 · This resource of gene-indexed mutations helps to address the need for the functional analysis of genes of interests via the reverse genetic approach. Moreover, a rapid and low-cost pipeline for gene mapping was constructed in maize from a revision of the previously described MutMap in rice (. Abe et al., 2012. ). scroll click on laptop

Maize Gene Atlas Developed by RNA Sequencing and …

Category:MaizeSNPDB: A comprehensive database for efficient retrieve …

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Maize gene database

Welcome to the maize gene co-expression network

WebSep 4, 2024 · The Maize Genomics Resource contains a set of search and query tools including a BLAST server, genome browsers for AGPv4, ... Hoopes et al. (2024) An … WebObjective 2: Design and maintain complex syntheses of MaizeGDB map and gene data critical to research. Include consensus genetic and QTL maps. Milestone 1. Maintain updated consensus genetic maps, including bins maps and a high-resolution IBM based genetic map. FY2004-06: Each year, update consensus genetic maps: IBM Neighbors …

Maize gene database

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WebImproved maize reference genome with single-molecule technologies. Nature 546, 524 Link. Pan, Q., Li, L., Yang, X., Tong, H., Xu, S., Li, Z., Li, W., Muehlbauer, G.J., Li, J., and … WebFeb 20, 2016 · Maize (Zea mays) is one of the most important cereal crops in the world due its importance to human nutrition and health. Thus, identifying and annotating all the …

WebJun 10, 2016 · Shown in Supplemental Figure S4 are RNA fragments per kilobase of transcript per million mapped reads values for the two maize and two sorghum genes from the qTeller database. The maize na2 gene (GRMZM2G057000) had an average FPKM value of 179.2 across all tissues and treatments, with the highest expression in the … WebThe gene sources for the MaizeGDB gene sets include both the name of the maize line and the MaizeGDB gene set name, e.g. "B73 Zm00001eb.1", to make it easy to select a maize line of interest. Query for genes: ... The query templates in this category allow you to retrieve gene database crossreference ids for B73 (Zm00001eb.1 <=> RefSeq) and …

WebDec 15, 2011 · RescueMu-tagged GSS sequences are generated by Maize Gene Discovery Project. Sequences matching GSS contigs have been annotated : SRGD: A searchable database of splicing related genes ... proteins in maize using the Plant Genome Database PlantGDB". (1-28-2012) GenBank Release 187 (Jan 31) GenBank Release 187.0 … http://maize.uga.edu/

WebApr 23, 2013 · Transcriptome analysis is a valuable tool for identification and characterization of genes and pathways underlying plant growth and development. We …

WebCloneEZ™ Gene Database; For each citation that was shared on social media (LinkedIn, Facebook, or Twitter) with the “@GenScript” tag, the author will be rewarded with a $10 Amazon gift card or 2,000 GS points. ... breeding has met with limited success because natural resistance to U. maydis is organ specific and involves numerous maize ... scroll click mouse wheelWebOct 22, 2024 · MaizeMine also provides database cross references between genes of alternative gene sets from Gramene and NCBI RefSeq. MaizeMine includes several search tools, including a keyword search, built-in template queries with intuitive search menus, and a QueryBuilder tool for creating custom queries. pc check for hacksWeb2 days ago · Background In plants, RNA silencing is an important conserved mechanism to regulate gene expression and combat against abiotic and biotic stresses. Dicer-like (DCL) and Argonaute (AGO) proteins and RNA-dependent RNA polymerase (RDR) are the core elements involved in gene silencing and their gene families have been explored in many … pc check for windows 10WebJan 1, 2024 · This database is of value to the functional genomic studies of maize, although only a simple query interface is provided. The maize reference genome used in … scroll clipart wordWebNational Center for Biotechnology Information pc check for update free softwareWebMaize has long been a model organism for the study of quantitative genetics and phenotypic variation. The overall goal of this project is to use functional genomics approaches to … pc check heathttp://www.zeamap.com/ pc check for vr